Computational Science, Engineering, and Mathematics: CSE

Lower-Division Courses

Upper-Division Courses

CSE X70. Individual Reading and Research.

Supervised study or research in a selected area of computational science, engineering, and mathematics by individual arrangement with a supervising instructor.

Graduate Courses

CSE X80. Tools and Techniques of Computational Science.

Advanced introduction to the practical use of high performance computing hardware and software engineering principles for scientific technical computing. Topics include computer architectures, operating systems, programming languages, data structures, interoperability, and software development, management, and performance.

CSE X82G. Computer Graphics.

Advanced material in computer graphics, including in-depth treatments of techniques for realistic image synthesis, advanced geometric modeling methods, animation and dynamic simulation, scientific visualization, and high-performance graphics architectures.

CSE X82M. Foundational Techniques of Machine Learning and Data Sciences.

Introduction to computational and mathematical tools of data science. Cover statistical estimation and optimization algorithms, neural networks, geometry of high dimensional spaces, randomized methods, sparse approximation, and dimension reduction techniques.

CSE X83C. Numerical Analysis: Linear Algebra.

Survey of numerical methods in linear algebra: floating-point computation, solution of linear equations, least squares problems, algebraic eigenvalue problems.

CSE X83D. Numerical Analysis: Interpolation, Approximation, Quadrature, and Differential Equations.

Survey of numerical methods for interpolation, functional approximation, integration, and solution of differential equations.

CSE X83K. Numerical Analysis: Algebra and Approximation.

Advanced introduction to scientific computing, theory and application of numerical linear algebra, solution of nonlinear equations, and numerical approximation of functions.

CSE X83L. Numerical Analysis: Differential Equations.

Advanced introduction to the theory and practice of commonly used numerical algorithms for the solution of ordinary differential equations, and elliptic, parabolic, and hyperbolic partial differential equations.

CSE X84K. Theory of Probability.

CSE X84L. Theory of Probability.

Continuation of Computational Science, Engineering, and Mathematics 384K and Mathematics 385C.

CSE X84R. Mathematical Statistics I.

The general theory of mathematical statistics. Includes distributions of functions of random variables, properties of a random sample, principles of data reduction, an overview of hierarchical models, decision theory, Bayesian statistics, and theoretical results relevant to point estimation, interval estimation, and hypothesis testing.

CSE X84S. Mathematical Statistics II.

Continuation of Computational Science, Engineering, and Mathematics 384R and Mathematics 384C.

CSE X84T. Regression Analysis.

Simple and multiple linear regression, inference in regression, prediction of new observations, diagnosis and remedial measures, transformations, and model building. Emphasis on both understanding the theory and applying theory to analyze data.

CSE X84U. Design and Analysis of Experiments.

Design and analysis of experiments, including one-way and two-way layouts; components of variance; factorial experiments; balanced incomplete block designs; crossed and nested classifications; fixed, random, and mixed models; and split plot designs.

CSE X85M. Methods of Mathematical Physics I.

Theory of analytic functions; linear algebra and vector spaces; orthogonal functions; ordinary differential equations; partial differential equations; Green's functions; complex variables.

CSE X85N. Methods of Mathematical Physics II.

Continuation of Computational Science, Engineering, and Mathematics 385M and Physics 381M. Topology, functional analysis, approximation methods, group theory, differential manifolds.

CSE X85R. Real Analysis.

Measure and integration over abstract spaces; Lebesgue's theory of integration and differentiation on the real line.

CSE X85S. Complex Analysis.

Introduction to complex analysis.

CSE X86C. Methods of Applied Mathematics.

Topics include basic normed linear space theory; fixed-point theorems and applications to differential and integral equations; Hilbert spaces and the spectral theorem; applications to Sturm-Liouville problems; approximation and computational methods such as the Galerkin, Rayleigh-Ritz, and Newton procedures.

CSE X86D. Methods of Applied Mathematics.

Topics include distributions, fundamental solutions of partial differential equations, the Schwartz space and tempered distributions, Fourier transform, Plancherel theorem, Green's functions, Sobolev spaces, weak solutions, differential calculus in normed spaces, implicit function theorems, applications to nonlinear equations, smooth variational problems, applications to classical mechanics, constrained variational problems.

CSE X86L. Mathematical Methods in Science and Engineering.

Explore mathematical frameworks for understanding and solving practical problems. Examine basic concepts in multidimensional real analysis, ordinary differential equations and dynamical systems, elementary calculus of variations, Hilbert space theory and duality, Sturm-Liouville theory, Lax-Milgram and Babuska-Necas Theorems, and applications to partial differential equations.

CSE X86M. Functional Analysis in Theoretical Mechanics.

An introduction to modern concepts in functional analysis and linear operator theory, with emphasis on their application to problems in theoretical mechanics; topological and metric spaces, norm linear spaces, theory of linear operators on Hilbert spaces, applications to boundary value problems in elasticity and dynamical systems.

CSE X89C. Introduction to Mathematical Modeling in Science and Engineering I.

First part of a two-part introduction to the elements of classical mechanics, physics, chemistry, and biology needed to begin work in computational engineering and sciences. Develops from first principles the classical mathematical theories underlying many of the models of physical phenomena important in modern applications.

CSE X89D. Introduction to Mathematical Modeling in Science and Engineering II.

Second part of a two-part introduction to elements of classical mechanics, physics, chemistry, and biology needed to work in computational engineering and sciences. Develops from first principles the classical mathematical theories underlying many of the models of physical phenomena important in modern applications.

CSE X90. Individual Research.

Individual study or research in computational science, engineering, and mathematics arranged by mutual agreement between student and supervising faculty member.

CSE X90T. Training in the Teaching of Computational Science, Engineering, and Mathematics.

CSE X92. Topics in Computer Science.

Advanced topics in the theory and application of computer science. Recent topics include geometric modeling and visualization, and high-performance and parallel computing.

CSE X92.1. Parallel Algorithms in Scientific Computing.

Explore the application of parallel algorithms in machine learning, graph analytics, and modeling and simulation. Examine high-performance computing, parallel non-numerical and numerical algorithms for shared and distributed memory architectures. Discuss examples including sorting, merging, searching, linear algebra, graph algorithms, KD-trees, and fast transforms. Explore theory, programming, and performance optimization and analysis.

CSE X93. Topics in Numerical Analysis.

Advanced topics in the theory and application of numerical analysis. Recent topics include numerical methods for partial differential equations, computational problems in linear algebra, iterative methods and fast algorithms, numerical methods in functional approximation, and computational and variational methods for inverse problems.

CSE X93.1. The Finite Element Method.

Examine introductory concepts such as weighted residual methods; strong and weak forms; boundary conditions; global v. local basis functions; error estimates; smooth and nonsmooth problems; one-dimensional second- and fourth-order problems; two-dimensional potential and plate problems; two-dimensional and three-dimensional elasticity; dynamic and eigenvalue problems; numerical, computational, and meshing issues; applications using commercial software.

CSE X93F. Finite Element Methods.

Derivation and implementation of the finite element method; basic coding techniques; application to problems of stress and diffusion.

CSE X93H. Advanced Theory of Finite Element Methods.

Contemporary topics in the theory and application of finite element methods.

CSE X93N. Numerical Methods for Flow and Transport Problems.

Approximate solution methods for flow and transport problems in engineering and applied science. Finite element, finite difference, and residual methods for linear and nonlinear problems.

CSE X93P. Computational and Variational Methods for Inverse Problems.

Examine computational and variational methods for inverse problems governed by partial differential equations, including variational formulations, ill-posedness, regularization, adjoint methods for sensitivity analysis, variational discretization, and efficient large-scale optimization algorithms. Explore a brief introduction to the Bayesian formulation and relationship to the deterministic setting. Discuss examples drawn from different areas of science and engineering, including continuum fluid and solid mechanics, geophysics, and image processing.

CSE X94. Topics in Probability and Statistics.

Advanced topics in the theory and application of probability and statistics. Recent topics include nonparametric statistics and advanced probability.

CSE X94.1. Stochastic Processes I.

Study Ito-diffusion processes, stochastic calculus, and stochastic integration. Explore stochastic differential equations and their connection to classical analysis. Discuss an introduction to optimal stochastic control of diffusion processes, the Hamilton-Jacobi-Bellman equation (classical and viscosity solutions), singular stochastic control, and linear filtering. Present applications, mainly from mathematical finance, inventory theory, decision analysis, and insurance. Examine brief overview of multi-scale problems in stochastic analysis.

CSE X96. Topics in Applied Mathematics.

Advanced topics in the theory and application of applied mathematics. Recent topics have included partial differential equations, dynamical systems, kinetic theory, quantum mechanics, ergodic theory, statistical mechanics, Hamiltonian dynamics, nonlinear functional analysis, Euler and Navier-Stokes equations, microlocal calculus and spectral asymptotics, calculus of variations, and nonlinear partial differential equations.

CSE X96.1. Partial Differential Equations I.

Analyze nonlinear partial differential equations, emphasizing elliptic and parabolic equations.

CSE X97. Topics in Computational Science and Engineering.

Advanced topics in the theory and application of computational science and engineering.

CSE X97.1. Multiscale Methods in Computational Fluid Dynamics.

Explore stabilized and variational multiscale methods in computational fluid dynamics with a focus on advective-diffusive equations, the Boltzmann equation, and the compressible and incompressible Navier-Stokes equations.

CSE X97.2. Nonlinear Static and Dynamic Finite Element Analysis.

Explore code architecture and fundamental analytical technologies used in the nonlinear finite element and isogeometric analysis of solids and structures.

CSE X97.3. Validation and Uncertainty Quantification in Computational Models.

Assess reliability of computational models of physical systems through validation and uncertainty quantification. Develop uncertainty analysis in terms of Bayesian probability and inference, and techniques for probabilistic model validation.

CSE X97.4. Computational Modeling of the Cardiovascular System.

Explore mathematical models and simulation of the cardiovascular system, with an emphasis on the biomechanical function of the heart, heart valves, and the vasculature. Analyze mathematical models at the level of single cells, tissues, and whole organs. Discuss image-to-model software basics to allow creation of a model of choice from any available imaging data for a project of interest.

CSE X97.5. Biomechanics of Tissues, Scaffolds, and Cells.

Discuss biosolid mechanics, covering the complex mechanical behaviors of living tissues and related biomaterials, with a focus on modeling how they respond under loading. Examine major application areas to provide context to the theory and applications. Explore necessary mathematical, mechanics, and biological fundamentals in the context of applications and problems in biomedical research and medical devices.

CSE X97.6. Introduction to Computational Oncology.

Develop a familiarity with the common computational techniques used in modeling various aspects of cancer at multiple spatial and temporal scales. Investigate how computational modeling offers unique and complementary information to traditional methods of cancer research. Examine the integration of theory and experiment while identifying the current barriers preventing computational modeling from having a broader impact on both cancer biology and clinical oncology.

CSE X97.7. Introduction to Mathematical and Physical Biology.

Discuss the common mathematical and physical techniques used in modeling various aspects of biology at multiple spatial and temporal scales. With emphasis placed on the integration of theory and experiment, identify the current barriers preventing computational modeling from having a broader impact in biology.

CSE X97.8. Biomedical Imaging: Signals and Systems.

Explore the physical principles and signal processing techniques used in thermographic, ultrasonic, and radiographic imaging, including image reconstruction from projections such as CT scanning, MRI, and millimeter wave determination of temperature profiles.

CSE X97.9. Mathematical Physiology.

Explore mathematical modeling in physiology, how physiological problems can be formulated and modeled, and how such models give rise to interesting and challenging functional features. Examine several exemplar physiological systems. Discuss the mathematical aspects of growth and remodeling in living systems, an area unique to living systems.

CSE X97H. Graduate Research Internship.

Practical work experience in a research/industrial setting. Internship to be arranged by student and approved by instructor.

CSE X98. Thesis.

CSE X98R. Master's Report.

Preparation of a report to fulfill the requirement for the master's degree under the report option.

CSE X99W. Dissertation.

Professional Courses